Different hypoxic response of human CAVII and Caenorhabditis elegans homologous genes CAH-3, CAH-4, CAH-5

dc.authorid0000-0003-1754-0700
dc.authorid0000-0001-6758-8556
dc.contributor.authorBozkurt, Aysu
dc.contributor.authorTürkoğlu, Sümeyye Aydoğan
dc.contributor.authorPoyrazlı, Fatma
dc.contributor.authorOkuyan, Derya
dc.date.accessioned2026-02-23T06:36:17Z
dc.date.issued2025
dc.departmentFakülteler, Fen-Edebiyat Fakültesi, Moleküler Biyoloji ve Genetik Bölümü
dc.descriptionBozkurt, Aysu Türkoğlu, Sümeyye Aydoğan Poyrazlı, Fatma (Balikesir Author)
dc.description.abstractBackground/aim: A number of carbonic anhydrase (CA) family proteins have been implicated in cancer. They contribute to the hypoxic microenvironment. CAVII is often downregulated in colorectal carcinoma and it has been associated with increased tumor size, node metastasis, and adverse clinical outcomes. In this study, we aimed to investigate the effect of hypoxia on CAVII protein in human colon cancer and prostate cancer cells. In addition, the regulation of CAH genes in Caenorhabditis elegans was examined. These are homologous to CAVII in humans. Materials and methods: CAVII expression was analyzed in different cell lines such as human colon cancer (SW480 and HT-29), human prostate cancer (PC3 and LNCaP), human hepatocellular carcinoma (Hep3B) and Human umbilical vein endothelial cells (HUVEC). HT-29 and LNCaP cell lines were subjected to a chemical hypoxia model with CoCl2. Real-time PCR was used for CAVII mRNA analysis. Western blot and immunofluorescence (IF) staining were used to detect the CAVII protein. The response of CAH genes was also studied at the mRNA level in a chemical hypoxia model with sodium sulfite in C. elegans. CAVII and CAVII-like genes CAH-3, CAH-4, and CAH-5 were analyzed bioinformatically. Results: We found that CAVII expression decreased under hypoxic conditions in HT-29, but conversely, increased in LNCaP cells at the mRNA and protein level. In the hypoxia model in C. elegans, CAH genes were downregulated. According to bioinformatics analyses, human CAVII was most similar to CAH-3 (98%). Conclusion: The results emphasize the necessity of addressing hypoxic regulation in different cell and organism groups in cancer and healthy conditions for CA family members that change under physiological and pathophysiological conditions. Postgenomic studies are important to better understand the evolution of these ancient enzymes.
dc.description.sponsorshipBalikesir Üniversitesi BAP 2023/008
dc.description.sponsorshipNIH P40 OD010440
dc.identifier.doi10.55730/1300-0152.2753
dc.identifier.endpage379
dc.identifier.issn1300-0152
dc.identifier.issn1303-6092
dc.identifier.issue4
dc.identifier.pmid40917301
dc.identifier.scopus2-s2.0-105014019264
dc.identifier.scopusqualityQ2
dc.identifier.startpage367
dc.identifier.trdizinid1334734
dc.identifier.urihttps://doi.org/10.55730/1300-0152.2753
dc.identifier.urihttps://hdl.handle.net/20.500.12462/23035
dc.identifier.volume49
dc.identifier.wosWOS:001546796200002
dc.identifier.wosqualityQ3
dc.indekslendigikaynakTR-Dizin
dc.language.isoen
dc.publisherTUBITAK
dc.relation.ispartofTurkish Journal of Biology
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.relation.tubitakinfo:eu-repo/grantAgreement/TUBITAK/TOVAG-123Z001en_US
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectCarbonic Anhydrase VII
dc.subjectHypoxia
dc.subjectColon Cancer
dc.subjectProstate Cancer
dc.subjectCaenorhabditis Elegans
dc.titleDifferent hypoxic response of human CAVII and Caenorhabditis elegans homologous genes CAH-3, CAH-4, CAH-5
dc.typeArticle

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